BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D08SP1|AL428899
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig972 1302 0.0
3x_Contig1229 418 e-117
>3x_Contig972
Length = 5081
Score = 1302 bits (657), Expect = 0.0
Identities = 678/685 (98%)
Strand = Plus / Plus
Query: 1 gatatattgaaagatcaaataaagacttttgataatcttgccaaagttgccccagatcta 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4394 gatatattgaaagaccaaataaagacttttgataatcttgccaaagttgccccagatcta 4453
Query: 61 attaatactaaaaccacttctattccgaaaatggagaatcttttaaagcctcgtttacat 120
|| || || ||| | |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4454 atgaagacgaaatctacttctattccgaaaatggagaatcttttaaagcctcgtttaaat 4513
Query: 121 catccagatttagacccaatgaatgttattttaaaagaagatgatgatgttccttactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4514 catccagatttagacccaatgaatgttattttaaaagaagatgatgatgttccttactta 4573
Query: 181 ttggactttgaaggatcatccattaagccttacattttacaaaacactcctcaatttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4574 ttggactttgaaggatcatccattaagccttacattttacaaaacactcctcaatttgtt 4633
Query: 241 gcctacgatggaccaaaaatctatgacctagaaaaggatattgaagggtacaaggacatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4634 gcctacgatggaccaaaaatctatgacctagaaaaggatattgaagggtacaaggacatg 4693
Query: 301 gaagaatcggaaaaagccaaacttgagttcatgtacaagcgtactcgtaaccagttttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4694 gaagaatcggaaaaagccaaacttgagttcatgtacaagcgtactcgtaaccagttttta 4753
Query: 361 tgggagtttgctttaaatgaaaacttacctgaattgatctcttctgtcgctccaccaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4754 tgggagtttgctttaaatgaaaacttacctgaattgatctcttctgtcgctccaccaatc 4813
Query: 421 aaagttttgagaaacccttatgtggctgccatcgaaagaaagtccgacgaagaatacctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4814 aaagttttgagaaacccttatgtggctgccatcgaaagaaagtccgacgaagaatacctt 4873
Query: 481 ttgattgaagaagctcttcttcaattggctgaagtctggccgatcttcgctaataacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4874 ttgattgaagaagctcttcttcaattggctgaagtctggccgatcttcgctaataacaaa 4933
Query: 541 ttagtaaatgccgctgaatacccactaaaatattccgaagaagaagtcaaaaagcatgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4934 ttagtaaatgccgctgaatacccactaaaatattccgaagaagaagtcaaaaagcatgct 4993
Query: 601 gatgcattgaacgcttatcatgagaaactgatttcccaaccatttgccgctacccaagga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4994 gatgcattgaacgcttatcatgagaaactgatttcccaaccatttgccgctacccaagga 5053
Query: 661 tggatgccacaagatatgtttgata 685
|||||||||||||||||||||||||
Sbjct: 5054 tggatgccacaagatatgtttgata 5078
>3x_Contig1229
Length = 4630
Score = 418 bits (211), Expect = e-117
Identities = 224/227 (98%), Gaps = 1/227 (0%)
Strand = Plus / Minus
Query: 688 ctagttcaaggtggcattttggtaaaaaatgagaaaggagattacgttatttctcgcacg 747
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4624 ctagttcaaggtggcattttggtaaaaaatgagaaaggagattttgttatttctcgcacg 4565
Query: 748 -gaagatgcctaaatctgcgaacagacttttcttcttgtaaataaatattctgaacaact 806
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4564 agaagatgcctaaatctgcgaacagacttttcttcttgtaaataaatattctgaacaact 4505
Query: 807 ctatagctataaatttttttgccttcctggtttacagcagaggagcgttcttgtgaccat 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 ctatagctataaatttttttgccttcctggtttacagcagaggagcgttcttgtgaccat 4445
Query: 867 cattatatgaaatcaaagaatgttggcctaatttcctgtattatcca 913
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 cattatatgaaatcaaagaatgttggcctaatttcctgtattatcca 4398
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8496
Number of Sequences: 1807
Number of extensions: 8496
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 2
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)